Gets data from the standard reference tables

Usage

ctsm_get_info(
  ref_table,
  input,
  output,
  compartment = NULL,
  na_action = c("fail", "input_ok", "output_ok", "ok"),
  info_type = NULL,
  sep = "."
)

Arguments

ref_table: the reference table
input: the input
output: the output
compartment: the compartment
na_action: character, how to handle missing values, one of: fail (no missing values allowed), input_ok (allows missing values in input, but all non-missing values must be recognised, and must have output), output_ok`` requires all input values to be present, but allows missing values in output (for e.g. dryweight by species), or ok` (allows missing values everywhere)
info_type: the information type, by default picked up from the function call
sep: character, the separator, defaulting to '.'